REFERENCES


A list of scientific papers documenting results obtained with the PSI instruments.

2009

  • Cerveny J., Setlik I., Trtilek M., and Nedbal L. (2009): Photobioreactor for cultivation and real-time, in-situ measurement of O2 and CO2 exchange rates, growth dynamics, and of chlorophyll fluorescence emission of photoautotrophic microorganisms. Eng. Life Sci. 9 (3), pp. 247-253.
  • Harding S.A., Jarvie M.M., Lindroth R.L. and Tsai Ch-J. (2009): A comparative analysis of phenylpropanoid metabolism, N utilization, and carbon partitioning in fast- and slow-growing Populus hybrid clones. J. Exp. Botany, Vol. 60 (12), pp. 3443-3452.
  • Cerveny J. and Nedbal L. (2009): Metabolic rhythms of the cyanobacterium Cyanothece sp. ATCC 51142 correlate with modeled dynamics of circadian clock. J. Biol. Rhythms, Vol. 24 (4), pp. 295-303.
  • Rocchetta I. and Kuepper H. (2009): Chromium and copper induced inhibition of photosynthesis in Euglena gracilis analysed on the single-cell level by fluorescence kinetic microscopy. New Phytologist 182, pp. 405-420.
  • Kuepper H., Andresen E., Wiegert S., Simek M., Leitenmaier B. and Setlik I. (2009): Reversible coupling of individual phycobiliprotein isoforms during state transitions in the cyanobacterium Trichodesmium analysed by single-cell fluorescence kinetic measurements. BBA (Bioenergetics) 1787, pp. 155-167.
  • Kuepper H., Mijovilovich A., Goetz B., Kuepper F.C., and Meyer-Klaucke W. (2009): Complexation and toxicity of copper in higher plants (I): Characterisation of copper accumulation, speciation and toxicity in Crassula helmsii as a new copper hyperaccumulator. Plant Physiol., DOI:10.1104/pp.109.139717.
  • Mijovilovich A., Leitenmaier B., Meyer-Klaucke W., Kroneck P.M.H., Goetz B., and Kuepper H. (2009): Complexation and toxicity of copper in higher plants (II): Different mechanisms for Cu vs. Cd detoxification in the Cu-sensitive Cd/Zn hyperaccumulator Thlaspi caerulescens (Ganges ecotype). Plant Physiol., DOI: 10.1104/pp.109.144675.
  • Andresen E., Lohscheider J., Setlikova E., Adamska I., Simek M., and Kuepper H. (2009): Acclimation of Trichodesmium erythraeum ISM101 to high and low irradiance analysed on the physiological, biophysical and biochemical level. New Phytologist, pp.
  • Zhang M., Wang H., and Yu C. (2009): The examination of high temperature stress of Ammopiptanthus mongolicus by chlorophyll fluorescence induction parameters. Ecology and Environm. Sciences 18 (6), pp. 2272-2277.
2008
  • Klem K. and Bajerova E. (2008): Adjustment of herbicide dose in sugar beet based on non-invasive chlorophyll fluorescence measurements. AgEng 2008 Conference, Hersonissos, Crete.
  • Klem K. (2008): Prediction of spring barley nutrition state and grain quality using spectral reflectance and chlorophyll fluorescence. Precision Agriculture - ICPA 2008.
  • Kuepper H., Setlik I., Seibert S., Prasil O., Setlikova E., Strittmatter M., Levitan O., Lohscheider J., Adamska I., and Bergman-Frank I. (2008): Iron limitation in the marine cyanobacterium Trichodesmium reveals new insights into regulation of photosynthesis and nitrogen fixation. New Phytol. 179, pp. 784-798.
  • Nedbal L., Trtilek M., Cerveny J., Komarek O., and Pakrasi H.B. (2008): A Photobioreactor system for precision cultivation of photoautotrophic microorganisms and for high-content analysis of suspension dynamics. Biotechnol. Bioengineering Vol. 100 (5), pp. 902-910.
  • Chi W., Ma J., Zhang D., Guo J., Chen F., Lu C. and Zhang L. (2008): The pentratricopeptide repeat protein delayed greening is involved in the regulation of early chloroplast development and chloroplast gene expression in Arabidopsis. Plant Physiol. 147, pp. 573-584.
  • Pan X., Deng C., Zhang D., Wang J., Guijin M., and Chen Y. (2008): Toxic effects of amoxicillin on the photosystem II of Synechocystis sp. characterized by a variety of in vivo chlorophyll fluorescence tests. Aquatic Toxicology 2008.
  • Allahverdiyeva Y., Sairanen I., Stensjö K., Lindblad P., and Aro E.M. (2008): Photosynthetic electron transport properties of an uptake hydrogenase deletion mutant of Nostoc punctiforme PCC 73102. In: Photosynthesis. Energy from the Sun, pp. 3-5.
  • Odrowaz Piramowicz M., Bock R., Orzechowska A., Strzałka K., and Burda K. (2008): Binding sites of cadmium ions within Photosystem II. In: Photosynthesis. Energy from the Sun, pp. 305-308.
  • Thapper A., Mamedov F., and Styring S. (2008): IR-induced photochemistry in Photosystem II. In: Photosynthesis. Energy from the Sun, pp. 522-524.
  • Binal D., Litvin R., and Vacha F. (2008): Relationship of the in vivo bacteriochlorophyll fluorescence and the state of the photosynthetic apparatus in purple bacteria. In: Photosynthesis. Energy from the Sun, pp. 559-562.
  • Burda K., Schöttler M.A., Orzechowska A., Kruk J. Strzałka K., and Bock R. (2008): Regulatory function of cytochrome b559 in Photosystem II. In: Photosynthesis. Energy from the Sun, pp. 305-308.
  • Higuchi M., Matsui K., Ichikawa T., Kondou Y., Hasegawa Y., Kawashima M, Hirochika H., and Matsui M. (2008): Identification of photosynthesis-related genes in rice using FOX hunting system. In: Photosynthesis. Energy from the Sun, pp. 597-600.
  • Orzechowska A., Bock R., Odrowaz Piramowicz M., Strzałka K., and Burda K. (2008): Cu2+ Binding Sites in PSII. In: Photosynthesis. Energy from the Sun, pp. 661-664.
  • Oh M.H., Park T.S., Yang W.H., Kwak K.S., Shin J.C., Safarova R.B., Eu Y.J., Paek N.C., Leeb C.H., and Choi K.J. (2008): Leaf senescence in a stay-green rice variety, SNU-SG1, and a mutant, sgr. In: Photosynthesis. Energy from the Sun, pp. 1515-1518.
  • Rohacek K., Kloz M., Bina D., Batysta F., and Vacha F. (2008): Investigation of non-photochemical processes in photosynthetic bacteria and higher plants using interference of coherent radiation – a novel approach. In: Photosynthesis. Energy from the Sun, pp. 1549-1552.
  • Kos P.B., Deak Z., Cheregi O., and Vass I. (2008): Light induced exchange of different psbA gene copies in the cyanobacterium thermosynechococcus elongatus. In: Photosynthesis. Energy from the Sun, pp. 39-42.
  • Cser K. and Vass I. (2008): Regulation of photoprotection by non-radiative charge recombination in Photosystem II. In: Photosynthesis. Energy from the Sun, pp. 47-50.
  • Vass I., Cser K., Telfer A., Benson S.L., Barber J., and Deak Z. (2008): Energetics of Photosystem II charge recombination in acaryochloris marina studied by thermoluminescence and flash induced chlorophyll fluorescence measurements. In: Photosynthesis. Energy from the Sun, pp. 231-234.
  • Hamilton M., Franco E., Deak Z., Vass I., and Nixon P. (2008): Cytochrome b-559 is important for modulating electron transfer on the acceptor side of Photosystem II and for photoprotection during assembly of the Mn4Ca complex. In: Photosynthesis. Energy from the Sun, pp. 413-417.
  • Deak Z. and Vass I. (2008): Oscillating yield of flash-induced chlorophyll fluorescence decay in intact cells of thermosynechococcus elongatus. In: Photosynthesis. Energy from the Sun, pp. 573-576.
  • Ido K., Ifuku K., Ishihara S., Yamamoto Y., Miyake C., and Sato F. (2008): Effects of PsbP knockdown on the photosynthetic electron transfer in nicotiana tabacum. In: Photosynthesis. Energy from the Sun, pp. 605-608.
  • Zhang P., Sicora1 C.I., Vorontsova N., Allahverdiyeva Y., Battchikova N., Nixon P.J., and Aro E.M. (2008): Expression of inducible inorganic carbon acquisition complexes is under the control of the FtsH protease in synechocystis sp. PCC 6803. In: Photosynthesis. Energy from the Sun, pp. 829-833.
  • Soukupova J., Csefalvay L., Urban O., Kosvancova M., Marek M., Rascher U., and Nedbal L. (2008): Annual variation of the steady-state chlorophyll fluorescence emission of evergreen plants in temperate zone. Biotechnol. Bioengineering Vol. 35, pp. 1-14.
2007
  • Bartak M., Vaczi P., Hajek J., and Smykla J. (2007): Low-temperature limitation of primary photosynthetic processes in Antarctic lichens Umbilicaria antarctica and Xanthoria elegans. Polar Biol. Vol. 31, No. 1, pp. 47-51.
  • Miura E., Kato Y., Matsushima R., Albrecht V., Soumaya L., and Sakamoto W. (2007): The balance between protein synthesis and degradation in chloroplasts determines leaf variegation in Arabidopsis yellow variegated mutants. Plant Cell 19, pp. 1313-1328.
  • Ozaki H., Ikeuchi M., Ogawa T., Fukuzawa H., and Sonoike K. (2007): Large scale analysis of chlorophyll fluorescence kinetics in Synechocystis sp. PCC 6803: Identification of the factors involved in the modulation of photosystem stoichiometry. Plant Cell Physiol. 17284470 (P.S.E.B.).
  • Kuepper H., Aravind P., Leitenmaier B., Trtilek M. and Setlik I. (2007): Cadmium-induced inhibition of photosynthesis and long-term acclimation to Cd-stress in the Cd hyperaccumulator Thlaspi caerulescens. New Phytologist Vol. 175(4), pp. 655-674.
  • Hogewoning S.W. and Harbinson J. (2007): Insights on the development, kinetics, and variation of photoinhibition using chlorophyll fluorescence imaging of a chilled, variegated leaf. J. Exp. Botany Vol. 58, No. 3, pp. 453-463.
  • Vacha F., Sarafis V., Benediktyova Z., Bumba L., Valenta J., Vacha M., Sheue Ch.-R. and Nedbal L. (2007): Identification of PSI and PSII enriched regions of thylakoid membrane by optical microimaging of cryo-fluorescence emission spectra and of variable fluorescence. Micron 38: 170-175.
2006
  • Pfalz J., Liere K., Kandlbinder A., Dietz K.-J., and Oelmueller R. (2006): pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. Plant Cell 18, pp. 176-197.
  • Matous K., Benediktyova Z., Berger S., Roitsch T., and Nedbal L. (2006): Case study of combinatorial imaging: What protocol and what chlorophyll fluorescence image to use when visualizing infection of Arabidopsis thaliana by Pseudomonas syringae? Photosynth. Res. 90 (3), pp. 243-253.
  • Vaczi P. and Bartak M. (2006): Photosynthesis of lichen symbiotic alga Trebouxia erici as affected by irradiance and osmotic stress. Biol. Plant. 50 (2), pp. 257-264.
  • Hajek J., Bartak M. and Dubova J. (2006): Inhibition of photosynthetic processes in foliose lichens induced by temperature and osmotic stress. Biol. Plant. 50 (4), pp. 624-634.
  • Gachon C.M.M., Kuepper H., Kuepper F.C. and Setlik I. (2006): Witnessing effects of a pathogen on photosynthesis of its host at the cellular level: chlorophyll fluorescence kinetic microscopy of Pylaiella littoralis (Phaeophyceae)infected by Chytridium polysiphoniae (Chytridiomycota). European Journal of Phycology 41, pp. 395-403.
  • Pfalz J., Liere K., Kandlbinder A., Dietz K.J. and Oelmuller R. (2006): pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. Plant Cell 18, pp. 176-197.
  • Zabka M., Drastichova K., Jegorov A., Soukupova J. and Nedbal L. (2006): Direct evidence of plant-pathogenic activity of fungal metabolites of Trichothecium roseum on apple. Mycopathologia 162 (1), pp. 65-68.
  • Shlyk-Kerner O., Samish I., Kaftan D., Holland N., P. S. Sai M., Kless H. and Scherz A .(2006): Protein flexibility acclimatizes photosynthetic energy conversion to the ambient temperature. Nature 442, pp. 827-830.
  • Bartak M., Solhaug K.A., Vrablikova H. and Gauslaa Y. (2006): Curling during desiccation protects the foliose lichen Lobaria pulmonaria against photoinhibition. Ecophysiology Vol. 149, No. 4, pp. 553-560.
  • Berger S., Benediktyova Z., Matous K., Bonfig K., Mueller M.J., Nedbal L. and Roitsch T. (2006): Visualization of dynamics of plant-patogen interaction by novel combination of chlorophyll fluorescence imagin and statistical analysis: Differential effects of virulent and avirulent strains of P. syringae and of oxylipins on A. thaliana. J. Exp. Bot. 58 (4), pp. 797-806
  • Hill R. and Ralph P. (2006): Photosystem II heterogeneity of in hospite zooxanthellae in scleractinian corals exposed to bleaching conditions. Photochem. Photobiol. 82 (6), pp. 1577-1585.
  • Lazar D. (2006): The polyphasic chlorophyll a fluorescence rise measured under high intensity of exciting light. Functional Plant Biology 33 (1), pp. 9-30.
2005
  • Keren N., Liberton M. and Pakrasi H.B. (2005): Photochemical competence of assembled Photosystem II core complex in cyanobacterial plasma membrane. J. Biol. Chem., Vol. 280, No. 8, pp. 6548-6553.
  • Diaz C., Purdy S., Christ A., Morot-Gaudry J.F., Wingler A., and Masclaux-aubresse C. (2005): Characterization of markers to determine the extent and variability of leaf senescense in arabidopsis. A metabolic profiling approach. Plant Physiology, Vol. 138, pp. 898-908.
  • Nedbal L., Brezina V., Cerveny J. and Trtilek M. (2005): Photosynthesis in dynamic light: Systems biology of unconventional chlorophyll fluorescence transients in Synechocystis sp.PCC6803. Photosynth. Res. 84, 99-106.
  • Koblizek M., Ston-Egiert J., Sagan S., and Kolber Z.S. (2005): Diel changes in bacteriochlorophyll a concentration suggest rapid bacterioplankton cycling in the Baltic Sea. FEMS Microbiology Ecology 51 (3), 353–361.
  • Setlikova E., Setlik I., Kuepper H., Kasalicky V. and Prasil O. (2005): The photosynthesis of individual algal cells during the cell cycle of Scenedesmus quadricauda studied by chlorophyll fluorescence kinetic microscopy. Photosynthesis Research 84, pp. 113-120.
  • Leeuwe M.A., vanSikkelerus B., Gieskes W.W.C. and Stefels J. (2005): Taxon-specific differences in photoacclimation to fluctuating irradiance in an Antarctic diatom and a green flagellate. Mar. Ecol. Prog. Ser., Vol. 288, pp. 9-19.
  • Baerr J.N., Thomas J.D., Taylor B.G., Roderme S.R. and Gray G.R. (2005): Differential photosynthetic compensatory mechanisms exist in the immutans mutant of Arabidopsis thaliana. Physiol. Plantarum, Vol. 124, p. 390.
  • Thornton L.E., Keren N., Ohad I. and Pakrasi H.B. (2005): Physcomitrella patens and Ceratodon purpureus, mosses and model organisms in photosynthesis studies. Photosynthesis Research, Vol. 83, pp. 87-96.
  • Inoue-Kashino N., Kashino Y., Satoh K., Terashima I. and Pakrasi H.B. (2005): PsbU provides a stable architecture for the oxygen-evolving system in cyanobacterial Photosystem II. Biochemistry, Vol. 44, pp. 12214-12228.
  • Adamec F., Kaftan D., and Nedbal L. (2005): Stress-induced filament fragmentation of Calothrix elenkinii (cyanobacteria) is facilitated by death of high-fluorescence cells. J. Phycol. 41, p. 835.
  • Fujimori T., Higuchi M., Sato H., Aiba H., Muramatsu M., Hihara Y. and Sonoike K. (2005): The mutant of sll1961, which encodes a putative transcriptional regulator, has a defect in regulation of photosystem stochiometry in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiol. 139, pp. 408-416.
  • Wingler A., Brownhill E. and Pourtau N. (2005): Mechanisms of the light-dependent induction of cell death in tobacco plants with delayed senescence. J. Exp. Botany, Vol. 56, pp. 2897-2905.
  • Vacha F, Bumba L, Kaftan D, et al. (2005): Microscopy and single molecule detection in photosynthesis. Micron 36 (6), pp. 483-502.
  • Kluge A. and Nordmeyer H. (2005): Weed identification with chlorophyll fluorescence image analysis. SSWM Workshop, Bygholm.
2004
  • Roose J.L. and Pakrasi H.B. (2004): Evidence that D1 processing is required for manganese binding and extrinsic protein assembly into Photosystem II. J. Biol. Chem., Vol. 279, No. 44, pp. 45417-45422.
  • Kupper H., Setlik I., Spiller M., Kupper F.C. and Prasil O. (2004): Heavy metal-induced inhibition of photosynthesis: targets of in vivo heavy metal chlorophyll formation1. Journal of Phycology, Vol. 38, No.3, pp. 429-441.
  • Kupper H., Ferimazova N., Setlik I. and Berman-Frank I. (2004): Traffic lights in Trichodesmium: regulation of photosynthesis for nitrogen fixation studied by chlorophyll fluorescence kinetic microscopy. Plant Physiology 135 (4), pp. 2120-2133.
  • Mock T. and Valentin K. (2004): Photosynthesis and cold acclimation: Molecular evidence from a polar diatom. J. Phycol. 40, pp. 732-741.
  • Allahverdiyeva Y., Deak Z., Szilard A., Diner B.A., Nixon P.J. and Vass I. (2004): The function of D1-H332 in Photosystem II electron transport studied by thermoluminescence and chlorophyll fluorescence in site-directed mutants of Synechocystis 6803. European Journal of Biochemistry, Vol. 271, No. 17, pp. 3523-3532.
  • Eriksson M., Moseley J.L., Tottey S., del Campo J.A., Quinn J., Kim Z. and Merchant S. (2004): Genetic dissection of nutritional copper signaling in Chlamydomonas distinguishes regulatory and target genes. Genetics 168, pp. 795-807.
  • Page M.L.D., Hamel P.P., Gabilly S.T., Zegzouti H., Perea J.V., Alonso J.M., Ecker J.R., Theg S.M., Christensen S.K. and Merchan S. (2004): A homolog of prokaryotic thiol-disulfide transporter CadA is required for the assembly of the cytochrome b6f complex in Arabidopsis chloroplasts. J. Biol. Chemistry, Vol. 279, pp. 32474-32482.
  • Gavel, A. and Marsalek, B. (2004): A novel approach for phytotoxicity assessment by CCD fluorescence imaging. Environ. Toxicol. 19 (4), pp. 429-432.
  • Nedbal L. and Whitmarsh J. (2004): Chlorophyll fluorescence imaging of leaves and fruits. In: Chlorophyll Fluorescence: A Signature of Photosynthesis. Papageorgiou G.C. and Govindjee (eds), Kluwer Academic Publishers.
  • Kasinathan V. and Wingler A. (2004): Effect of reduced arginine decarboxylase activity on salt tolerance and on polyamine formation during salt stress in Arabidopsis thaliana. Physiol. Plant., Vol. 121, p. 101.
  • Lezhneva L., Amann K., and Meurer J. (2004): The universally conserved HCF101 protein is involved in assembly of [4Fe-4S]-cluster-containing complexes in Arabidopsis thaliana chloroplasts. Plant Journal, Vol. 37, No. 2, pp. 174-185.
  • Lezhneva L. and Meurer J. (2004): The nuclear factor HCF145 affects chloroplast psaA-psaB-rps14 transcript abundance in Arabidopsis thaliana. Plant Journal, Vol. 38, No. 5, pp, 740-753.
  • Bartak M., Hajek J., Vrablikova H. and Dubova J. (2004): High-light stress and photoprotection in Umbilicaria antarctica monitored by chlorophyll fluorescence imaging and changes in zeaxanthin and glutathione. Plant. Biol., Vol 6, pp. 333-341.
  • DalBosco C., Lezhneva L., Biehl A., Leister D., Strotmann H., Wanner G. and Meurer J. (2004): Inactivation of the chloroplast ATP synthase γ subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. J. Biol. Chem., Vol. 279, No. 2, pp. 1060-1069.
  • Pourtau N., Mares M., Purdy S., Quentin N., Ruel A. and Wingler A. (2004): Interactions of abscisic acid and sugar signalling in the regulation of leaf senescence. Planta 219, pp. 765-772.
  • Wingler A., Mares M. and Pourtau N. (2004): Spatial patterns and metabolic regulation of photosynthetic parameters during leaf senescence. New Phytologist, Vol. 161, Issue 3, p. 781.
  • Schonfeld C., Wobbe L., Borgstadt R., Kienast A., Nixon P.J. and Kruse O. (2004): The nucleus-encoded protein MOC1 is essential for mitochondrial light acclimation in Chlamydomonas reinhardtii. J. Biol. Chem., Vol. 279, No. 48, pp. 50366-50374.
  • Kupper H., Ferimazova N., Setlik I. and Berman-Frank I. (2004): Traffic lights in trichodesmium. Regulation of photosynthesis for nitrogen fixation studied by chlorophyll fluorescence kinetic microscopy. Plant Physiology, Vol. 135, pp. 2120-2133.
  • Walter A., Rascher U. and Osmond C.B. (2004): Transition in photosynthetic parameters of midvein and interveinal regions of leaves and their importance during leaf growth and development. Plant Biology 6, pp. 184-191.
2003
  • Suzuki T., Minagawa J., Tomo T., Sonoike K., Ohta H. and Enami I. (2003): Binding and functional properties of the extrinsic proteins in oxygen-evolving Photosystem II particle from a green alga Chlamydomonas reinhardtii having His-tagged CP47. Plant Cell Physiol. 44, pp. 76-84.
  • Hamel P.P., Dreyfuss B.W., Xie Z., Gabilly S.T. and Merchant S. (2003): Essential histidine and tryptophan residues in CcsA, a system II polytopic cytochrome c biogenesis protein. J. Biol. Chemistry, Vol. 278, No. 4, pp.2593-2603.
  • Gray G.R., Hope B.J., Qin X., Taylor B.G. and Whitehead C.L. (2003): The characterization of photoinhibition and recovery during cold acclimation in Arabidopsis thaliana using chlorophyll fluorescence imaging. Physiol. Plantarum, Vol. 119, Issue 3, p. 365.
  • Keranen M., Aro E.-M. Tyystjarvi E., Nevalainen O. (2003): Automatic plant identification with chlorophyll fluorescence fingerprinting. Precision Agriculture, Vol. 4, No. 1, pp. 53-67.
  • Varsano T. and Kaftan D. (2003): Effects of iron deficiency on thylakoid membrane structure and composition in algae. J. Plant Nutrition., Vol. 26, pp. 2197-2210.
  • Kouril R., Lazar D., Lee H., Jo J. and Naus J. (2003): Moderately elevated temperature eliminates resistance of rice plants with enhanced expression of glutathione reductase to intensive photooxidative stress. Photosynthetica, Vol. 41, No. 4, pp. 571-578.
  • Kromkamp J.C. and Forster R.C. (2003): The use of variable fluorescence measurements in aquatic ecosystems: differences between multiple and single turnover measuring protocols and suggested terminology. Physiol. Plantarum, Vol. 125 (3), pp. 381-391.
  • Sommer F., Hippler M., Biehler K., Fischer N. and Rochaix J.D. (2003): Comparative analysis of photosensitivity in Photosystem I donor and acceptor side mutants of Chlamydomonas reinhardtii. Plant, Cell and Environment, Vol. 26, Issue 11, p. 1881.
  • Küpper H., Šetlík I., Šetliková E., Ferimazova N., Spiller M. and Küpper F.C. (2003): Copper-induced inhibition of photosynthesis: limiting steps of in vivo copper chlorophyll formation in Scenedesmus quadricauda. Functional Plant Biology 30(12), pp. 1187-1196.
  • Halverson K.M. and Barry B.A. (2003): Sucrose and glycerol effects on Photosystem II. Biophysical Journal, Vol. 85, pp. 1317-1325.
  • Sicora C., Mate Z. and Vass I. (2003): The interaction of visible and UV-B light during photodamage and repair of Photosystem II. Photosynthesis Research 75 (2), pp. 127-137.
  • Hamel P.P., Dreyfuss B.W., Xie Z., Gabilly S.T. and Merchant S. (2003): Essential Histidine and Tryptophan Residues in CcsA, a System II Polytopic Cytochrome c Biogenesis Protein. J. Biol. Chem., Vol. 278, Issue 4, pp. 2593-2603.
  • Gray G.R., Hope B.J., Qin X., Taylor B.G. and Whitehead C.L. (2003): The characterization of photoinhibition and recovery during cold acclimation in Arabidopsis thaliana using chlorophyll fluorescence imaging. Physiol Plant 119: 365-375.
2002
  • Kim H.J., Jung J.E. and Lee C.H. (2002): In vivo monitoring of the incorporation of chemicals into cucumber and rice leaves by chlorophyll fluorescence imaging. J. Plant Biotechnol. 4, pp.173-179.
  • Mock T. and Kroon B.M.A. (2002): Photosynthetic energy conversion under extreme conditions: Important role of lipids as structural modulators and energy sink under N-limited growth in Antarctic sea ice diatoms. Phytochemistry 61, pp. 41-51.
  • Torzillo G., Goksan T., Faraloni C., Kopecky J. and Masojidek J. (2002): Interplay between photochemical activities and pigment composition in an outdoor culture of Haematococcus pluvialis during the shift from the green to red stage. J. Appl. Phycol., Vol. 00, pp. 1-10.
  • Komenda J., Lupinkova L. and Kopecky J. (2002): Absence of the psbH gene product destabilizes Photosystem II complex and bicarbonate binding on its acceptor side in Synechocystis PCC 6803. Eur. J. Biochem., Vol. 269, pp. 610-619.
  • Moseley J.L., Allinger T., Herzog S., Hoerth P., Wehinger P., Merchant S. and Hippler M. (2002): Adaptation to Fe-deficiency requires remodeling of the photosynthetic apparatus. The EMBO Journal, Vol. 21, No. 24, pp. 6709-6720.
  • Kana R., Lazar D., Prasil O., Naus J. (2002): Experimental and theoretical studies on the excess capacity of Photosystem II. Photosynthesis Research, Vol. 72, pp. 271-284.
  • Kaftan D., Brumfeld V., Nevo R., Scherz A. and Reich Z. (2002): From chloroplasts to photosystems: In situ scanning force microscopy on intact thylakoid membranes. The EMBO Journal, Vol. 21, No. 22, pp. 6146-6153.
  • Svensson B., Tiede D. and Barry B. (2002): His 190 and Glu 189 provide structural stabilization in Photosystem II. Biochemistry, Vol. 41, pp.11456-11465.
  • Ivleva N.B., Sidoruk K.V., Pakrasi H.B. and Shestakov S.V. (2002): Investigation of the functional role of Ctp proteins in the Cyanobacterium synechocystis sp. PCC 6803. Microbiology, Vol. 71, No. 4, pp. 433-437.
  • Lindell D., Erdner D., Marie D., Prasil O., Koblizek M., LeGall F., Rippka R., Partensky F., Scanlan D.J. and Post A.F. (2002): Nitrogen stress response of Prochlorococcus strain PCC9511 (Oxyphotobacteria) involves contrasting regulation of ntcA and amt1. J. Phycol. 38, pp. 1113-1124.
  • Nedbal L. and Brezina V. (2002): Complex metabolic oscillations in plants forced by harmonic irradiance. Biophys. J., Vol. 83, pp. 2180-2189.
  • Ferimazova N., Kuepper H., Nedbal L. and Trtilek M. (2002): New insights into photosynthetic oscillations revealed by two-dimensional microscopic measurements of chlorophyll fluorescence kinetics in intact leaves and isolated protoplasts. Photochem. Photobiology, Vol. 76, pp. 501-508.
2001
  • Berman-Frank I., Lungren P., Chen Y.-B., Kuepper H., Kolber Z., Bergman B. and Falkowski P. (2001): Segregation of nitrogen fixation and oxygenic photosynthesis in the marine cyanobacterium Trichodesmium. Science 294, pp.1534-1537.
  • Koblizek M., Kaftan D. and Nedbal L. (2001): On the relationship between the non-photochemical quenching of the chlorophyll fluorescence and the Photosystem II light harvesting efficiency. A repetitive flash fluorescence induction study. Photosynthesis Research 68, pp. 141-152.
  • Regel R.E., Ivleva N.B., Zer H., Meurer J., Shestakov S.V., Herrmann R.G., Pakrasi H.B. and Ohad I. (2001): Deregulation of electron flow within Photosystem II in the absence of the PsbJ protein. J. Biol. Chemistry, Vol. 276, pp. 41473-41478.
  • Steglich C., Behrenfeld M., Koblizek M., Claustre H., Penno S., Prasil O., Pertensky F. and Hess W.R. (2001): Nitrogen deprivation strongly affects Photosystem II but not phycoerythrin level in the divinyl-chlorophyll b-containing cyanobacterium Prochlorococcus marinus. Biochimica et Biophisica Acta, Vol. 1503, pp. 341-349.
  • Bertrand M., Schoefs B., Siffel P., Rohacek K. and Molnar I. (2001): Cadmium inhibits epoxidation of diatoxanthin to diadinoxanthin in the xanthophyll cycle of the marine diatom Phaeodactylum tricornutum. FEBS Letters 508, pp. 153-156.
  • Hermans C., Chaerle L., Rodriguez R.M., VanDer Straeten D., Strasser R.J. and Delhaye J.P. (2001): Biosensing methods to assess environmental stress encountered by sugar beet (Beta vulgaris L). Proceedings of the 64th IIRB Congress, 26-27 June 2001, Bruges, Belgium.
2000
  • Bartak M., Hajek J. and Gloser J. (2000): Heterogeneity of chlorophyll fluorescence over thalli of several foliose macrolichens exposed to adverse environmental factors: Interspecific differences as related to thallus hydration and high irradiance. Photosynthetica 38, pp. 531-537.
  • Kuepper H., Setlik I., Trtilek M. and Nedbal L. (2000): A microscope for two-dimensional measurements of in vivo chlorophyll fluorescence kinetics using pulsed measuring radiation, continuous actinic radiation, and saturating flashes. Photosynthetica 38, pp.553-570.
  • Govindjee and Nedbal L. (2000): The chlorophyll fluorescence imaging and its application in plant science and technology. Photosynthetica 38, pp. 481-482.
  • Nedbal L., Soukupova J., Whitmarsh J. and Trtilek M. (2000): Postharvest imaging of chlorophyll fluorescence from lemons can be used to predict fruit quality. Photosynthetica 38, pp. 571-579.
  • Nedbal L., Soukupova J., Kaftan D., Whitmarsh J., Trtilek M. (2000): Kinetic imaging of chlorophyll fluorescence using modulated light. Photosynthesis Research 66, pp. 3-12.
  • Zak E. and Pakrasi H.B. (2000): The BtpA protein stabilizes the reaction center proteins of Photosystem I in the cyanobacterium Synechocystis sp. PCC 6803 at low temperature. Plant Physiology, Vol. 123, pp. 215-222.
  • Skotnica J., Matouskova M., Naus J., Lazar D. and Dvorak L. (2000): Thermoluminescence and fluorescence study of changes in Photosystem II photochemistry in desiccating barley leaves. Photosynthesis Research 65 (1), pp. 29-40.
  • Strasser R.J., Srivastava A., Tsimili-Michael M. (2000): The fluorescence transient as a tool to characterize and screen photosynthetic samples. In: Probing Photosynthesis: Mechanism, Regulation and Adaptation (M. Yunus, U. Pathre and P. Mohanty, eds.), Chapter 25, pp 445-483.
  • Ohkawa H., Pakrasi H.B. and Ogawa T. (2000): Two types of functionally distinct NAD(P)H dehydrogenases in Synechosystis sp. strain PCC6803. J. Biol. Chemistry, Vol. 275, pp. 13630-13634.
1999
  • Dijkman N., Kaftan D., Trtilek M. and Nedbal L. (1999): Measurements of phytoplankton of sub-nanomolar chlorophyll concentration by a modified double-modulation fluorometer. Photosynthetica 37(2), pp.249-254.
  • Kaftan D., Meszaros T., Whitmarsh J., Nedbal L. (1999): Characterization of Photosystem II activity and heterogeneity during the cell cycle of the green alga Scenedesmus quadricauda. Plant Physiol. 120, pp. 433-441.
  • Koblizek M., Ciscato M., Komenda J., Kopecky J., Siffel P., Masojidek J. (1999): Photo adaptation in the green alga Spongiochloris sp. A three-fluorometer study. Photosynthetica 37, pp. 307-323.
  • Meetam M., Keren N., Ohad I., Pakrasi H.B. (1999): The PsbY protein is not essential for oxygenic photosynthesis in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiology 121, pp.1267-1272.
  • Nedbal L., Trtilek M., Kaftan D. (1999): Flash fluorescence induction: a novel method to study regulation of Photosystem II. J. Photochem. Photobiol., Vol. 48, pp. 154-157.
  • Ritz M., Neverov K.V., Etienne A.-L. (1999): DpH-dependent fluorescence quenching and its photoprotective role in the unicellular red alga Rhodella violacea. Photosynthetica 37, pp. 267-280.
  • Cordier H., Karst F. and Berges T. (1999): Heterologous expression in Saccharomyces cerevisiae of an Arabidopsis thaliana cDNA encoding mevalonate diphosphate decarboxylase. Plant Mol. Biol. Vol. 39, No. 5, pp. 953-967.
  • Setlikova E., Sofrova D., Prasil O., Budac P., Koblizek M. and Setlik I. (1999): Integrity and activity of Photosystem 2 complexes isolated from the thermophilic cyanobacterium Synochococcus elongatus using various detergents. Photosynthetica 37, pp. 183-200.
  • Soukupova J., Lukavska A., Lukavsky J. and Nedbal L. (1999): Sensitivity of the algal biotest ISO 10253 to the Photosystem 2 herbicides in seawater. Photosynthetica 37, pp. 209-216.
  • Urban O., Trtilek M., Feild T. and Nedbal L. (1999): Single-turnover flashes to saturate QA reduction in a leaf were generated by the light-emitting diodes from a double modulation kinetic chlorophyll fluorometer. Photosynthetica 37, pp. 201-207.
  • Heck D.A., Miles D., and Chitnis P.R. (1999): Characterization of two photosynthetic mutants of maize1. Plant Physiol., Vol. 120, pp. 1129-1136.
1998
  • Feild T., Nedbal L. and Ort D.R. (1998): Non-photochemical reduction of the plastoquinone pool in sunflower leaves originates from chlororespiration. Plant Physiol., Vol. 116, pp.1209-1218.
  • Kaftan D., Trtilek M., Kroon B. and Nedbal L. (1998): Fast-response double-modulation fluorometer. In Photosynthesis: Mechanisms and Effects (Garab G., ed.), Vol. V, pp. 4297-4300, Kluwer, Dordrecht.
  • Meszaros T., Kaftan D., Prasil O., Setlik I., Whitmarsh J. and Nedbal L. (1998): Photosynthetic activity during the cell cycle of the green alga Scenedesmus quadricauda. In Photosynthesis: Mechanisms and Effects (Garab G., ed.), Vol. II, pp. 1165-1168, Kluwer, Dordrecht.
1997
  • Trtilek M., Kramer D.M., Koblizek M. and Nedbal L. (1997): Dual-modulation LED kinetic fluorometer. J. Lumin. 72-74, pp.597-599.
  • Koblizek M., Marek M., Komenda J. and Nedbal L. (1997): Light adaptation in the cyanobacterium Synechococcus sp. PCC7942 measured by the dual-modulation fluorometer. J. Lumin. 72-74, pp. 589-590.
1995
  • Tichy V., Paulson M., Grobbelaar J.U., Xiong F. and Nedbal L. (1995): Photosynthesis, growth and photoinhibition of microalgae exposed to intermittent light. In Photosynthesis: From Light to Boisphere (Mathis P., ed.), Vol. V, pp. 1029-1032, Kluwer, Dordrecht.
  • Grobbelaar J.U., Nedbal L., Tichy V. and Setlík I. (1995): Variation in some photosynthetic characteristics of microalgae cultured in outdoor thin-layered sloping reactors. J. Appl. Phycol. 7, pp.175-184.
  • Nedbal L. and Trtilek M. (1995): Diffuse-light dual-modulation fluorometer: monitoring of electron transfer reactions in Synechococcus elongatus exposed to intermittent light. In Photosynthesis: From Light to Biosphere (Mathis P., ed.), Vol. V, pp. 813-816, Kluwer, Dordrecht.